Package ch.systemsx.cisd.openbis.dss.etl.dto.api.impl

Class MaximumIntensityProjectionGenerationAlgorithm

java.lang.Object

ch.systemsx.cisd.openbis.dss.etl.dto.api.impl.MaximumIntensityProjectionGenerationAlgorithm

All Implemented Interfaces:

IImageGenerationAlgorithm, java.io.Serializable

public class MaximumIntensityProjectionGenerationAlgorithm
extends java.lang.Object
implements IImageGenerationAlgorithm, java.io.Serializable

Implementation of IImageGenerationAlgorithm which generates from a bunch of images a representative image where at each pixel the brightest pixel from the images are taken.

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
static java.lang.String	DEFAULT_FILE_NAME

Constructor Summary

Constructors

Constructor	Description
MaximumIntensityProjectionGenerationAlgorithm(java.lang.String dataSetTypeCode)	Creates an instance for the specified data set type.
MaximumIntensityProjectionGenerationAlgorithm(java.lang.String dataSetTypeCode, int width, int height)	Creates an instance for the specified data set type and specified image size.
MaximumIntensityProjectionGenerationAlgorithm(java.lang.String dataSetTypeCode, int width, int height, java.lang.String filename)	Creates an instance for the specified data set type, specified image size and specified file name.
MaximumIntensityProjectionGenerationAlgorithm(java.lang.String dataSetTypeCode, java.lang.String filename)	Creates an instance for the specified data set type and file name.

Method Summary

Modifier and Type	Method	Description
java.util.List<java.awt.image.BufferedImage>	generateImages(ImageDataSetInformation information, java.util.List<IDataSet> thumbnailDatasets, ch.systemsx.cisd.openbis.dss.etl.IImageProvider imageProvider)	Creates thumbnails for the specified data set info.
java.lang.String	getDataSetTypeCode()	Returns the code of the data set to be registered containing these representative thumbnails.
java.lang.String	getImageFileName(int index)	Returns the thumbnail file name for the specified index.
protected boolean	imageToBeIgnored(ImageFileInfo image)	Returns true if the specified image should be ignored.
void	setContent(IHierarchicalContent content)	Sets content which is the source of images.
MaximumIntensityProjectionGenerationAlgorithm	useThumbnails()	Uses thumbnails (if present) instead of original images.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

DEFAULT_FILE_NAME

public static final java.lang.String DEFAULT_FILE_NAME

See Also:

Constant Field Values

Constructor Detail

MaximumIntensityProjectionGenerationAlgorithm

public MaximumIntensityProjectionGenerationAlgorithm(java.lang.String dataSetTypeCode)

Creates an instance for the specified data set type. The generated image will have the same size as the original images. The file name will be maximum_intensity_projection.png.

MaximumIntensityProjectionGenerationAlgorithm

public MaximumIntensityProjectionGenerationAlgorithm(java.lang.String dataSetTypeCode,
                                                     java.lang.String filename)

Creates an instance for the specified data set type and file name. The generated image will have the same size as the original images.

MaximumIntensityProjectionGenerationAlgorithm

public MaximumIntensityProjectionGenerationAlgorithm(java.lang.String dataSetTypeCode,
                                                     int width,
                                                     int height)

Creates an instance for the specified data set type and specified image size. The file name will be maximum_intensity_projection.png.

MaximumIntensityProjectionGenerationAlgorithm

public MaximumIntensityProjectionGenerationAlgorithm(java.lang.String dataSetTypeCode,
                                                     int width,
                                                     int height,
                                                     java.lang.String filename)

Creates an instance for the specified data set type, specified image size and specified file name.

Method Detail

useThumbnails

public MaximumIntensityProjectionGenerationAlgorithm useThumbnails()

Uses thumbnails (if present) instead of original images.

getDataSetTypeCode

public java.lang.String getDataSetTypeCode()

Description copied from interface: IImageGenerationAlgorithm

Returns the code of the data set to be registered containing these representative thumbnails.

Specified by:

getDataSetTypeCode in interface IImageGenerationAlgorithm

generateImages

public java.util.List<java.awt.image.BufferedImage> generateImages(ImageDataSetInformation information,
                                                                   java.util.List<IDataSet> thumbnailDatasets,
                                                                   ch.systemsx.cisd.openbis.dss.etl.IImageProvider imageProvider)

Description copied from interface: IImageGenerationAlgorithm

Creates thumbnails for the specified data set info.

Specified by:

generateImages in interface IImageGenerationAlgorithm

setContent

public void setContent(IHierarchicalContent content)

Description copied from interface: IImageGenerationAlgorithm

Sets content which is the source of images. If this isn't set ImageDataSetInformation.getIncomingDirectory() is used.

Specified by:

setContent in interface IImageGenerationAlgorithm

imageToBeIgnored

protected boolean imageToBeIgnored(ImageFileInfo image)

Returns true if the specified image should be ignored. Can be overridden.

getImageFileName

public java.lang.String getImageFileName(int index)

Description copied from interface: IImageGenerationAlgorithm

Returns the thumbnail file name for the specified index. The index specifies the corresponding image returned by IImageGenerationAlgorithm.generateImages(ImageDataSetInformation, List, IImageProvider). Note, all file names generated by this method have to be different.

Specified by:

getImageFileName in interface IImageGenerationAlgorithm