Package ch.systemsx.cisd.openbis.dss.etl.dto.api.impl

Class ImageDataSetInformation

java.lang.Object

ch.systemsx.cisd.openbis.dss.generic.shared.dto.DataSetInformation

ch.systemsx.cisd.openbis.dss.etl.dto.api.BasicDataSetInformation

ch.systemsx.cisd.openbis.dss.etl.dto.api.impl.ImageDataSetInformation

All Implemented Interfaces:

java.io.Serializable

public class ImageDataSetInformation
extends BasicDataSetInformation

Extends DataSetInformation with information about images needed in HCS/Microscopy.

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor	Description
ImageDataSetInformation()

Method Summary

Modifier and Type	Method	Description
void	addSecondaryDataSetInformation(ch.systemsx.cisd.openbis.dss.generic.shared.dto.DataSetInformation dataSetInformation)
java.util.List<ChannelColorComponent>	getChannelColorComponents()
java.util.List<Channel>	getChannels()
java.lang.Integer	getColorDepth()
java.io.File	getDatasetRelativeImagesFolderPath()
ImageDataSetStructure	getImageDataSetStructure()
IImageGenerationAlgorithm	getImageGenerationAlgorithm()
java.io.File	getIncomingDirectory()
int	getMaximumImageHeight()
int	getMaximumImageWidth()
boolean	getRegisterAsOverviewImageDataSet()
java.util.List<ch.systemsx.cisd.openbis.dss.generic.shared.dto.DataSetInformation>	getSecondaryDataSets()
ThumbnailsInfo	getThumbnailsInfos()
boolean	isGenerateOverviewImagesFromRegisteredImages()
void	setChannels(java.util.List<Channel> channels)
void	setChannels(java.util.List<Channel> channels, java.util.List<ChannelColorComponent> channelColorComponents)
void	setColorDepth(java.lang.Integer colorDepth)
void	setDatasetRelativeImagesFolderPath(java.io.File datasetRelativeImagesFolderPath)
void	setGenerateOverviewImagesFromRegisteredImages(boolean generateOverviewImagesFromRegisteredImages)
void	setImageDataSetStructure(ImageDataSetStructure imageDataSetStructure)
void	setImageGenerationAlgorithm(IImageGenerationAlgorithm imageGenerationAlgorithm)
void	setIncomingDirectory(java.io.File incomingDirectory)	Sets the folder where all original images are located initially.
void	setMaximumImageHeight(int maximumImageHeight)
void	setMaximumImageWidth(int maximumImageWidth)
void	setRegisterAsOverviewImageDataSet(boolean registerAsOverviewImageDataSet)
void	setThumbnailsInfo(ThumbnailsInfo thumbnailsInfo)
java.lang.String	toString()

Methods inherited from class ch.systemsx.cisd.openbis.dss.etl.dto.api.BasicDataSetInformation

getFileFormatTypeCode, isMeasured, setDatasetTypeCode, setFileFormatCode, setMeasured, setParentDatasetCode, setSample

Methods inherited from class ch.systemsx.cisd.openbis.dss.generic.shared.dto.DataSetInformation

appendNameAndObject, describe, getContainedDataSetCodes, getDataSetCode, getDataSetKind, getDataSetProperties, getDataSetType, getExperimentIdentifier, getExternalCode, getExternalDataManagementSystem, getExtractableData, getInstanceUUID, getIsCompleteFlag, getParentDataSetCodes, getProducerCode, getProductionDate, getProjectCode, getSampleCode, getSampleIdentifier, getSampleProperties, getShareId, getSpaceCode, getSpeedHint, getUploadingUserIdOrNull, isContainerDataSet, isLinkDataSet, isLinkSample, isNoFileDataSet, setComplete, setContainedDataSetCodes, setContainerDataSet, setContainerDatasetPermId, setDataSetCode, setDataSetKind, setDataSetProperties, setDataSetType, setExperiment, setExperimentIdentifier, setExternalCode, setExternalDataManagementSystem, setExtractableData, setInstanceUUID, setLinkSample, setParentDataSetCodes, setProducerCode, setProductionDate, setProjectCode, setSample, setSampleCode, setSampleIdentifier, setSampleIdentifier, setSampleProperties, setShareId, setSpaceCode, setSpeedHint, setUploadingUserEmail, setUploadingUserId, tryGetContainerDataSet, tryGetContainerDatasetPermId, tryGetUploadingUserEmail, tryToGetExperiment, tryToGetSample

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

ImageDataSetInformation

public ImageDataSetInformation()

Method Detail

getIncomingDirectory

public java.io.File getIncomingDirectory()

getThumbnailsInfos

public ThumbnailsInfo getThumbnailsInfos()

getImageDataSetStructure

public ImageDataSetStructure getImageDataSetStructure()

getDatasetRelativeImagesFolderPath

public java.io.File getDatasetRelativeImagesFolderPath()

setIncomingDirectory

public void setIncomingDirectory(java.io.File incomingDirectory)

Sets the folder where all original images are located initially.

setDatasetRelativeImagesFolderPath

public void setDatasetRelativeImagesFolderPath(java.io.File datasetRelativeImagesFolderPath)

setThumbnailsInfo

public void setThumbnailsInfo(ThumbnailsInfo thumbnailsInfo)

setImageDataSetStructure

public void setImageDataSetStructure(ImageDataSetStructure imageDataSetStructure)

getMaximumImageWidth

public int getMaximumImageWidth()

setMaximumImageWidth

public void setMaximumImageWidth(int maximumImageWidth)

getMaximumImageHeight

public int getMaximumImageHeight()

setMaximumImageHeight

public void setMaximumImageHeight(int maximumImageHeight)

getChannels

public java.util.List<Channel> getChannels()

getChannelColorComponents

public java.util.List<ChannelColorComponent> getChannelColorComponents()

setChannels

public void setChannels(java.util.List<Channel> channels)

setChannels

public void setChannels(java.util.List<Channel> channels,
                        java.util.List<ChannelColorComponent> channelColorComponents)

getRegisterAsOverviewImageDataSet

public boolean getRegisterAsOverviewImageDataSet()

setRegisterAsOverviewImageDataSet

public void setRegisterAsOverviewImageDataSet(boolean registerAsOverviewImageDataSet)

isGenerateOverviewImagesFromRegisteredImages

public boolean isGenerateOverviewImagesFromRegisteredImages()

setGenerateOverviewImagesFromRegisteredImages

public void setGenerateOverviewImagesFromRegisteredImages(boolean generateOverviewImagesFromRegisteredImages)

getColorDepth

public java.lang.Integer getColorDepth()

setColorDepth

public void setColorDepth(java.lang.Integer colorDepth)

addSecondaryDataSetInformation

public void addSecondaryDataSetInformation(ch.systemsx.cisd.openbis.dss.generic.shared.dto.DataSetInformation dataSetInformation)

getSecondaryDataSets

public java.util.List<ch.systemsx.cisd.openbis.dss.generic.shared.dto.DataSetInformation> getSecondaryDataSets()

toString

public java.lang.String toString()

Overrides:

toString in class ch.systemsx.cisd.openbis.dss.generic.shared.dto.DataSetInformation

setImageGenerationAlgorithm

public void setImageGenerationAlgorithm(IImageGenerationAlgorithm imageGenerationAlgorithm)

getImageGenerationAlgorithm

public IImageGenerationAlgorithm getImageGenerationAlgorithm()