#!/usr/bin/python
'''
Copyright 2012 ETH Zuerich, CISD
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an "AS IS" BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.
'''
# @author Manuel Kohler
import subprocess
import shlex
import getpass
import xmlrpclib
import ConfigParser
import os
from datetime import datetime
SERVERS = {
"openbis@openbis-phosphonetx.ethz.ch" : "phosphonetx",
"openbis@obis.ethz.ch" : "yeastx",
"openbis@lmc-openbis.ethz.ch" : "lmc",
"openbis@infectx01.ethz.ch" : "infectx",
"sbsuser@openbis-dsu.ethz.ch" : "dsu",
"openbis@bs-plasmids.ethz.ch" : "csb",
"openbis@openbis-scu.ethz.ch" : "scu",
"openbis@basysbio.ethz.ch" : "basybio",
"openbis@openbis-cina.ethz.ch" : "cina",
"openbis@limb.ethz.ch" : "limb",
"openbis@newchipdb.ethz.ch" : "newchipdb",
"openbis@basynthec.ethz.ch" : "basynthec",
"openbis@sprint-openbis.ethz.ch" : "sprint",
"openbis@cisd-openbis.ethz.ch" : "demo",
"openbis@cmng-openbis.dbm.unibas.ch" : "sinergia"
}
PSQL_PROPERTIES = ["archive_mode",
"bgwriter_delay",
"bgwriter_lru_maxpages",
"bgwriter_lru_multiplier",
"checkpoint_segments",
"checkpoint_timeout",
"effective_cache_size",
"effective_io_concurrency",
"maintenance_work_mem",
"max_connections",
"server_version",
"shared_buffers",
"temp_buffers",
"wal_segment_size",
]
SSH_BIN = "/usr/bin/ssh"
SSH_KEY = "id_rsa"
SSH_PARAMETERS = "-o StrictHostKeyChecking=no -i"
PSQL_BIN = "/usr/bin/psql"
PSQL_PARAMETERS = " -Upostgres -c \\\"show all;\\\""
SINGLE_SPACE = " "
DOUBLE_QUOTE = "\""
NEWLINE = "\n"
PIPE = "|"
SERVER = 'https://wiki-bsse.ethz.ch:8443/rpc/xmlrpc'
CONFIGFILE = "wikiPostgres.conf"
ConfluenceToken = None
ConfluenceServer = xmlrpclib.ServerProxy(SERVER)
def getAbsolutePath():
'''
Returns the absolute path of the script itself
'''
return os.path.dirname(os.path.abspath( __file__ ))
def parseConfigurationFile():
'''
Python 2.7 Style
reads out the settings defined in the config file
'''
config = ConfigParser.ConfigParser()
# get the absolute path to the script
config.read(os.path.join(getAbsolutePath(), CONFIGFILE))
config.read(CONFIGFILE)
return config
def getTimestamp():
return datetime.now().strftime("%d %b %Y %H:%M:%S")
def logIntoConfluence(config):
'''
Logs user into Confluence and returns a session token
'''
user = config.get("DEFAULT", "username")
password = config.get("DEFAULT", "password")
ConfluenceToken = ConfluenceServer.confluence2.login(user, password)
return ConfluenceToken
def logOutConluence(token):
'''
Logs out from confluence and invalidates the session token
'''
ConfluenceServer.confluence2.logout(token)
def writeToConfluence (serverMap, token, config):
'''
Builds the content of the page and writes it into confluence
'''
wikiMarkup = ""
spacekey = config.get("DEFAULT", "spacekey")
pagetitle = config.get("DEFAULT", "pagetitle")
page = ConfluenceServer.confluence2.getPage(token, spacekey, pagetitle)
if page is None:
exit("Could not find page " + spacekey + ":" + pagetitle)
wikiMarkup = " \
\
\
\
\
\
\
"
for server in (serverMap.iterkeys()):
wikiMarkup += "
" + SERVERS[server] + "
"
wikiMarkup += "
"
try:
for property in PSQL_PROPERTIES:
wikiMarkup += "
" + property + "
"
for server in (serverMap.iterkeys()):
wikiMarkup += "