# Unique code of this Data Store Server. Not more than 40 characters. data-store-server-code = DSS2 # The root directory of the data store storeroot-dir = ../data/main-store # The directory where the command queue file is located; defaults to storeroot-dir commandqueue-dir = # Port port = 8445 # Session timeout in minutes session-timeout = 30 # Path to the keystore keystore.path = etc/openBIS.keystore # Password of the keystore keystore.password = changeit # Key password of the keystore keystore.key-password = changeit # The check interval (in seconds) check-interval = 2 # The time-out for clean up work in the shutdown sequence (in seconds). # Note that that the maximal time for the shutdown sequence to complete can be as large # as twice this time. shutdown-timeout = 2 # If free disk space goes below value defined here, a notification email will be sent. # Value must be specified in kilobytes (1048576 = 1024 * 1024 = 1GB). If no high water mark is # specified or if value is negative, the system will not be watching. highwater-mark = 1048576 # The URL of the LIMS server server-url = https://localhost:8443/openbis/openbis # The username to use when contacting the LIMS server username = etlserver2 # The password to use when contacting the LIMS server password = # The base URL for Web client access. download-url = https://localhost:${port} # SMTP properties (must start with 'mail' to be considered). mail.smtp.host = mail.ethz.ch # mail.from = datastore_server@localhost # mail.smtp.user = # mail.smtp.password = # Maximum number of retries if renaming failed. # renaming.failure.max-retries = 12 # The number of milliseconds to wait before retrying to execute the renaming process. # renaming.failure.millis-to-sleep = 5000 # The period of no write access that needs to pass before an incoming data item is considered # complete and ready to be processed (in seconds) [default: 300]. # Valid only when auto-detection method is used to determine if an incoming data are ready to be processed. quiet-period = 10 # Globally used separator character which separates entities in a data set file name data-set-file-name-entity-separator = _ # Comma separated names of processing threads. Each thread should have configuration properties prefixed with its name # E.g. 'code-extractor' property for the thread 'my-etl' should be specified as 'my-etl.code-extractor' inputs=a # The directory to watch for incoming data. a.incoming-dir = ../data/incoming-a a.incoming-data-completeness-condition = auto-detection # The extractor plugin class to use for data set information extraction a.data-set-info-extractor = ch.systemsx.cisd.etlserver.DefaultDataSetInfoExtractor # Separator used to extract the barcode in the data set file name a.data-set-info-extractor.entity-separator = ${data-set-file-name-entity-separator} a.data-set-info-extractor.sub-entity-separator = . a.data-set-info-extractor.strip-file-extension = true a.data-set-info-extractor.space-code = CISD a.data-set-info-extractor.index-of-experiment-identifier = 0 a.data-set-info-extractor.index-of-parent-data-set-codes = 1 a.type-extractor = ch.systemsx.cisd.etlserver.SimpleTypeExtractor a.type-extractor.file-format-type = TIFF a.type-extractor.locator-type = RELATIVE_LOCATION a.type-extractor.data-set-type = HCS_IMAGE a.storage-processor = ch.systemsx.cisd.etlserver.StorageProcessorWithDropbox a.storage-processor.processor = ch.systemsx.cisd.etlserver.StorageProcessorWithDropbox a.storage-processor.entity-separator = ${data-set-file-name-entity-separator} a.storage-processor.dropbox-dir = ../data/drop-box1 a.storage-processor.processor.processor = ch.systemsx.cisd.etlserver.DefaultStorageProcessor a.storage-processor.processor.dropbox-dir = ../data/drop-box2