To create a patched version of bioformats cherry pick those commits.


Cellomics dropbox speedup:

commit ff038535ff26f1c94c0f67b69229f212edf963b0
Author: Roger Leigh <r.leigh@dundee.ac.uk>
Date:   Tue May 7 10:28:25 2013 +0100

    CellomicsReader: Improve performance of initFile

    Move checking for hidden files to inside the loop over the file list.
    This avoids creating a Location object for each file twice: inside
    the loop and in Location.list().

-- apply patch from cellomics_dropbox_speedup.txt
TODO: this patch is pending pull request in bioformats library. Replace entry in this file with commit id when request is pulled to bioformats.

SOB-122:

commit 54c71f3e17e01112567e1fe726508390af010e04
Author: Melissa Linkert <melissa@glencoesoftware.com>
Date:   Tue Mar 19 14:45:00 2013 -0400

    LZW: prevent reading beyond the end of the stream

        Fixes #10525.
~