org.knime.base.node.viz.plotter.dendrogram
Class DendrogramDrawingPane
java.lang.Object
java.awt.Component
java.awt.Container
javax.swing.JComponent
javax.swing.JPanel
org.knime.base.node.viz.plotter.AbstractDrawingPane
org.knime.base.node.viz.plotter.dendrogram.DendrogramDrawingPane
- All Implemented Interfaces:
- ImageObserver, MenuContainer, Serializable, Accessible
public class DendrogramDrawingPane
- extends AbstractDrawingPane
Interprets the BinaryTree
of DendrogramPoint
s such
that the leaf nodes (the data points) are painted and the cluster nodes are
drawn with a horizontal line between the contained subnodes and vertical
lines to that subnodes. The distance of the two subclsuters is displayed on
the y axis, the data points are displayed on the x axis. A tooltip to provide
information about the exct distance is provided for the nodes.
- Author:
- Fabian Dill, University of Konstanz
- See Also:
- Serialized Form
Methods inherited from class javax.swing.JComponent |
addAncestorListener, addNotify, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBaseline, getBaselineResizeBehavior, getBorder, getBounds, getClientProperty, getComponentGraphics, getComponentPopupMenu, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getFontMetrics, getGraphics, getHeight, getInheritsPopupMenu, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPopupLocation, getPreferredSize, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, isDoubleBuffered, isLightweightComponent, isManagingFocus, isOpaque, isOptimizedDrawingEnabled, isPaintingForPrint, isPaintingTile, isRequestFocusEnabled, isValidateRoot, paint, paintBorder, paintChildren, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setComponentPopupMenu, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFocusTraversalKeys, setFont, setForeground, setInheritsPopupMenu, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update |
Methods inherited from class java.awt.Container |
add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, getMousePosition, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setLayout, transferFocusBackward, transferFocusDownCycle, validate, validateTree |
Methods inherited from class java.awt.Component |
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, hide, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, resize, resize, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusUpCycle |
DendrogramDrawingPane
public DendrogramDrawingPane()
- Inititalizes the tooltip.
setRootNode
public void setRootNode(BinaryTree<DendrogramPoint> root)
- Sets the view model (a binary tree containing points).
- Parameters:
root
- the view model.
setShowDots
public void setShowDots(boolean show)
- Parameters:
show
- true if dots should be displayed
getDotSize
public int getDotSize()
- Returns:
- the size of the dots.
setDotSize
public void setDotSize(int dotSize)
- Parameters:
dotSize
- sets the dot size
setLineThickness
public void setLineThickness(int thickness)
- Parameters:
thickness
- sets the line thickness
paintContent
public void paintContent(Graphics g)
- Paints a dendrogram such that the leaf nodes are painted at the border
(with distance 0) and on the nominal x axis and the cluster nodes are
drawn with increasing distance to the top (that is the distance is
plotted on the y axis). Each cluster node has exactly two subnodes,
a horizontal line on the height of the distance between these two
subnodes and two vertical lines from the end points of the
horizontal line to the subnodes.
Hilited (sub)nodes are colored with the hilite color and hilited and
selected clusteres are visualized through color and emphasized line
thickness.
Paints the actual content of the drawing pane.
- Specified by:
paintContent
in class AbstractDrawingPane
- Parameters:
g
- the graphics object
getToolTipText
public String getToolTipText(MouseEvent event)
- The original (not mapped) distance of the clustering between the two
subnodes.
- Overrides:
getToolTipText
in class JComponent
Copyright, 2003 - 2010. All rights reserved.
University of Konstanz, Germany.
Chair for Bioinformatics and Information Mining, Prof. Dr. Michael R. Berthold.
You may not modify, publish, transmit, transfer or sell, reproduce, create derivative works from, distribute, perform, display,
or in any way exploit any of the content, in whole or in part, except as otherwise expressly permitted in writing by the
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