apply from: 'http://svncisd.ethz.ch/repos/cisd/gradle/trunk/javaproject.gradle'
apply plugin: 'war'

archivesBaseName = 'openBIS-server-standard-technologies'

configurations {
	gwt
}

configurations {
	zipping
}

configurations {
	admin_partial
}

configurations {
	admin_full
}

dependencies {
	compile project(':screening'),
			project(':rtd_phosphonetx')
	
	providedCompile 'google:gwt-user:2.4',
					'google:gwt-dev:2.4'
					
	providedRuntime	'eclipse:jetty-util:8.1.8.v20121106',
					'eclipse:jetty-deploy:8.1.8.v20121106'
		
	gwt 'reveregroup:gwt-image-loader:1.1.4'
	
	zipping 'eclipse:jetty-distribution:8.1.8@zip'
	
	admin_partial 'google:gwt-user:2.4'
	
	admin_full 'cisd:cisd-base:+',
				'apache:commons-httpclient:+',
				'apache:commons-logging:+',
				'apache:commons-io:+',
				'apache:log4j:+',
				'springframework:spring-core:+',
				'springframework:spring-context:+',
				'springframework:spring-jdbc:+',
				'springframework:spring-orm:+',
				'springframework:spring-aop:+',								
				'marathon:marathon-spring-util:+',
				'springframework:spring-beans:+',
				'jline:jline:0.9.94'				
}

buildscript {
    apply from: '../gradle/repository.gradle'
    
    repositories repositoryConfig
    
	dependencies {
		classpath 'apache:commons-codec:+'	
	}
}

task compileGwt (dependsOn: classes, type: JavaExec) {

	buildDir = "${project.buildDir}/gwt"
	extraDir = "${project.buildDir}/extra"
     
	inputs.source sourceSets.main.java.srcDirs
	inputs.dir sourceSets.main.output.resourcesDir
	outputs.dir buildDir
     
	doFirst {
		file(buildDir).mkdirs()
	}
     
	main = 'com.google.gwt.dev.Compiler'
 
	classpath {
		[
			sourceSets.main.java.srcDirs,		
			project(":openbis").sourceSets.main.java.srcDirs,
			project(":openbis").sourceSets.main.output.resourcesDir,
			project(":openbis").sourceSets.main.output.classesDir,
			project(":openbis").sourceSets.main.compileClasspath,
			project(":common").sourceSets.main.java.srcDirs,
			project(":openbis_api").sourceSets.main.java.srcDirs,
			project(":screening").sourceSets.main.java.srcDirs,
			project(":screening").sourceSets.main.output.resourcesDir,
			project(":rtd_phosphonetx").sourceSets.main.java.srcDirs,
			project(":rtd_phosphonetx").sourceSets.main.output.resourcesDir,			
			configurations.gwt
		]   
	}
     
	args =
		[
			'ch.systemsx.cisd.openbis.OpenBIS',
			'-war', buildDir,
			'-logLevel', 'INFO',
			'-localWorkers', '2',
			'-compileReport', 
			'-extra', extraDir,
		]
	
	maxHeapSize = '1024m'
}


classpathEntries = files(
	project(':openbis').file('source/java/applicationContext.xml'),
	project(':openbis').file('source/java/dbConfigurationContext.xml'),
	project(':openbis').file('source/java/ehcache.xml'),
	project(':openbis').file('source/java/genericApplicationContext.xml'),
	project(':openbis').file('source/java/hibernateContext.xml'),
	project(':openbis').file('source/java/schema-for-xslt20.xsd'),
	project(':openbis').file('source/java/XMLSchema.xsd'),
	project(':screening').file('source/java/screening-applicationContext.xml'),
	project(':screening').file('source/java/screening-dssApplicationContext.xml'),
	project(':screening').file('source/java/screening-plugin-applicationContext.xml'),
	project(':rtd_phosphonetx').file('source/java/proteomics-applicationContext.xml'),
	project(':rtd_phosphonetx').file('source/java/proteomics-plugin-applicationContext.xml'),
	project(':common').file('source/java/genericCommonContext.xml'),
	'source/java/standard-technologies-applicationContext.xml'
)

zipEntries = files(
	project(':openbis').file('dist/server/check.sh'),
	project(':openbis').file('dist/server/configure.sh'),
	project(':openbis').file('dist/server/export-master-data.py'),
	project(':openbis').file('dist/server/export-master-data.sh'),
	project(':openbis').file('dist/server/install.sh'),
	project(':openbis').file('dist/server/jetty.xml'),		
	project(':openbis').file('dist/server/openBIS.keystore'),
	project(':openbis').file('dist/server/openbis.conf'),	
	project(':openbis').file('dist/server/passwd.sh'),
	project(':openbis').file('dist/server/register-master-data.sh'),
	project(':openbis').file('dist/server/service.properties'),
	project(':openbis').file('dist/server/setup-env'),
	project(':openbis').file('dist/server/shutdown.sh'),
	project(':openbis').file('dist/server/startup.sh'),
	project(':openbis').file('dist/server/status.sh'),
	project(':openbis').file('dist/server/version.sh'),
	project(':openbis').file('dist/server/watchdog.sh'),
	project(':openbis').file('dist/server/web-client.properties')
)

task checkFilesExist {
  inputs.files files(classpathEntries, zipEntries)
  doLast {
    classpathEntries.each {
   	  x -> assert x.exists()
    }
    zipEntries.each {
   	  x -> assert x.exists()
    }    
  }
}

war.dependsOn compileGwt
war.dependsOn checkFilesExist
war {
    from compileGwt.buildDir +"/ch.systemsx.cisd.openbis.OpenBIS"
    webXml = file('resource/server/web.xml')
    webInf {
    	from compileGwt.buildDir +"/WEB-INF",
    	project(':openbis').file('resource/server/bis-common.xml'),
    	project(':common').file('resource/server/web-common.xml')
    }
    classpath classpathEntries

    from('../openbis/source'){ 
        into("WEB-INF/classes") 
        include "sql/**/*.sql" 
        exclude "sql/generic/_ERD"
    } 

    from('../screening/source'){ 
        into("WEB-INF/classes") 
        include "sql/**/*.sql" 
        exclude "sql/imaging/postgresql/_ERD"        
    } 

    from('../rtd_phosphonetx/source/sql'){ 
        into("WEB-INF/classes") 
        include "proteomics/**/*.sql" 
    } 
}

task zipCorePlugins(type: Zip) {
    archiveName 'core-plugins.zip'
	from project(':rtd_phosphonetx').fileTree(dir: 'source/core-plugins', includes:['proteomics/**', 'proteomics-optional/**'], excludes:['**/dss/**', '**/package-to-dist'])
	from project(':screening').fileTree(dir: 'source/core-plugins', includes:['screening/**', 'screening-optional/**'], excludes:['**/dss/**', '**/package-to-dist'])
	from project(':deep_sequencing_unit').fileTree(dir: 'source/core-plugins', includes:['illumina-ngs/**'], excludes:['**/dss/**', '**/package-to-dist'])
	from 'dist/server/core-plugins.properties'
	into 'core-plugins'
}

task adminConsole(type: Jar) {
	archiveName 'openbis-admin-console.jar'
	includeEmptyDirs false
	from zipTree(project(':common').jar.archivePath).plus(
         zipTree(project(':openbis-common').jar.archivePath).plus( 
         zipTree(project(':screening').jar.archivePath).plus( 
         zipTree(project(':openbis').jar.archivePath)))).matching {
			include '**/ch/systemsx/cisd/common/spring/HttpInvokerUtils.class'
			include '**/ch/systemsx/cisd/common/**/*.class'
			include '**/ch/systemsx/cisd/openbis/common/**/*.class'
			include '**/ch/systemsx/cisd/openbis/generic/client/console/**/*.class'
			include '**/shared/I*.class'
			include '**/shared/basic/dto/**/*.class'
			include '**/shared/basic/*.class'
			include '**/shared/dto/**/*.class'
			include '**/shared/dto/*PE.class'
			include '**/shared/authorization/annotation/*.class'
			include '**/shared/authorization/ISessionProvider.class'
			include '**/*BuildAndEnvironmentInfo.class'
		}
	from zipTree(configurations.admin_partial.files.iterator().next()).matching {
			include '**/com/google/gwt/user/client/rpc/IsSerializable.class'
			include '**/com/google/gwt/user/client/rpc/SerializableException.class'
	}
	
	for (File f : configurations.admin_full.files) {
		from zipTree(f).matching {
			include '**/**'
		}
	}
    manifest {
	    attributes("Main-Class": "ch.systemsx.cisd.openbis.generic.client.console.AdminConsole",
    	           "Class-Path": "openbis-admin-console.jar cisd-base.jar commons-codec.jar commons-httpclient.jar commons-io.jar commons-logging.jar log4j.jar jline.jar spring.jar stream-supporting-httpinvoker.jar")
    }	
}
adminConsole.dependsOn war

task zipAdminConsole(type: Zip) {
	archiveName 'openbis-admin-console.zip'
	from adminConsole.archivePath
	into 'openbis-admin-console'
}
zipAdminConsole.dependsOn adminConsole


def generateMD5(final file) {
   java.security.MessageDigest digest = java.security.MessageDigest.getInstance("MD5")
   file.withInputStream(){is->
   byte[] buffer = new byte[8192]
   int read = 0
      while( (read = is.read(buffer)) > 0) {
             digest.update(buffer, 0, read);
         }
     }
   byte[] md5sum = digest.digest()
   BigInteger bigInt = new BigInteger(1, md5sum)
   return bigInt.toString(16)
}

task checksums {
	ext.destFile = new File(buildDir, 'configuration.MD5')
	ext.inputFiles = war.getSource().filter({file -> file.name.endsWith('xml') || file.name.endsWith('.conf') || file.name.endsWith('.properties')})
    inputs.files inputFiles
    outputs.file destFile
	doLast {
		if (destFile.exists()) {
			destFile.delete()
		}
		destFile.createNewFile()
		
		configFiles = classpathEntries.filter({file -> file.name.endsWith('xml') || file.name.endsWith('.conf') || file.name.endsWith('.properties')})
		configFiles.each {file ->
			destFile.text += generateMD5(file)+" webapps/openbis/WEB-INF/classes/"+file.name+"\n"
		}

		configFiles = war.getSource().filter({file -> file.name.endsWith('xml') || file.name.endsWith('.conf') || file.name.endsWith('.properties')}).minus(classpathEntries)
		configFiles.each {file ->
			destFile.text += generateMD5(file)+" webapps/openbis/WEB-INF/"+file.name+"\n"
		}		
	}
}
checksums.dependsOn war

task zip(type: Zip) {
    from war
	from zipEntries
	from checksums
	from configurations.zipping	
    from zipCorePlugins.archivePath
	from zipAdminConsole.archivePath
	rename 'jetty-distribution(.*).zip', 'jetty.zip'
	rename 'openBIS(.*).war', 'openBIS.war'	
}
zip.dependsOn war
zip.dependsOn zipCorePlugins
zip.dependsOn zipAdminConsole
zip.dependsOn checksums

build.dependsOn zip