package test.hdf5lib; import static org.junit.Assert.assertNotNull; import static org.junit.Assert.assertTrue; import static org.junit.Assert.fail; import java.io.File; import ncsa.hdf.hdf5lib.H5; import ncsa.hdf.hdf5lib.HDF5Constants; import ncsa.hdf.hdf5lib.exceptions.HDF5LibraryException; import ncsa.hdf.hdf5lib.structs.H5G_info_t; import org.junit.After; import org.junit.Before; import org.junit.Test; public class TestH5Gbasic { private static final String H5_FILE = "test.h5"; int H5fid = -1; private final int _createGroup(int fid, String name) { int gid = -1; try { gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Gcreate: " + err); } return gid; } private final void _deleteFile(String filename) { File file = new File(filename); if (file.exists()) { try {file.delete();} catch (SecurityException e) {} } } @Before public void createH5file() throws HDF5LibraryException, NullPointerException { assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0); H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL); } @After public void deleteH5file() throws HDF5LibraryException { if (H5fid > 0) { try {H5.H5Fclose(H5fid);} catch (Exception ex) {} } _deleteFile(H5_FILE); } @Test(expected = NullPointerException.class) public void testH5Gcreate_null() throws Throwable { int gid = -1; // it should fail because the group name is null gid = H5.H5Gcreate(H5fid, null, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); try {H5.H5Gclose(gid);} catch (Exception ex) {} } @Test(expected = HDF5LibraryException.class) public void testH5Gcreate_invalid() throws Throwable { H5.H5Gcreate(-1, "Invalid ID", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } @Test public void testH5Gcreate() { int gid = -1; try { gid = H5.H5Gcreate(H5fid, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Gcreate: " + err); } assertTrue(gid > 0); try {H5.H5Gclose(gid);} catch (Exception ex) {} } @Test public void testH5Gclose() { int gid = _createGroup(H5fid, "/testH5Gcreate"); assertTrue(gid > 0); try { H5.H5Gclose(gid); } catch (Throwable err) { fail("H5Gclose: " + err); } } @Test(expected = HDF5LibraryException.class) public void testH5Gcreate_exists() throws Throwable { int gid = _createGroup(H5fid, "/testH5Gcreate"); assertTrue(gid > 0); try {H5.H5Gclose(gid);} catch (Exception ex) {} // it should failed now because the group already exists in file gid = H5.H5Gcreate(H5fid, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } @Test public void testH5Gcreate_anon() { int gid = -1; try { gid = H5.H5Gcreate_anon(H5fid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Gcreate_anon: " + err); } assertTrue(gid > 0); try {H5.H5Gclose(gid);} catch (Exception ex) {} } @Test(expected = NullPointerException.class) public void testH5Gopen_null() throws Throwable { int gid = -1; gid = H5.H5Gopen(H5fid, null, HDF5Constants.H5P_DEFAULT); try {H5.H5Gclose(gid);} catch (Exception ex) {} } @Test(expected = HDF5LibraryException.class) public void testH5Gopen_invalid() throws Throwable { H5.H5Gopen(-1, "Invalid ID", HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Gopen_not_exists() throws Throwable { int gid = -1; gid = H5.H5Gopen(H5fid, "Never_created", HDF5Constants.H5P_DEFAULT); try {H5.H5Gclose(gid);} catch (Exception ex) {} } @Test public void testH5Gopen() { int gid = _createGroup(H5fid, "/testH5Gcreate"); assertTrue(gid > 0); try {H5.H5Gclose(gid);} catch (Exception ex) {} try { gid = H5.H5Gopen(H5fid, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Gopen: " + err); } assertTrue(gid > 0); try {H5.H5Gclose(gid);} catch (Exception ex) {} } @Test(expected = HDF5LibraryException.class) public void testH5Gget_create_plist_invalid() throws Throwable { H5.H5Gget_create_plist(-1); } @Test public void testH5Gget_create_plist() { int pid = -1; int gid = _createGroup(H5fid, "/testH5Gcreate"); assertTrue(gid > 0); try { pid = H5.H5Gget_create_plist(gid); } catch (Throwable err) { try {H5.H5Gclose(gid);} catch (Exception ex) {} err.printStackTrace(); fail("H5.H5Gget_create_plist: " + err); } assertTrue(pid > 0); try {H5.H5Pclose(pid);} catch (Exception ex) {} try {H5.H5Gclose(gid);} catch (Exception ex) {} } @Test(expected = HDF5LibraryException.class) public void testH5Gget_info_invalid() throws Throwable { H5.H5Gget_info(-1); } @Test public void testH5Gget_info() { H5G_info_t info = null; int gid = _createGroup(H5fid, "/testH5Gcreate"); assertTrue(gid > 0); try { info = H5.H5Gget_info(gid); } catch (Throwable err) { try {H5.H5Gclose(gid);} catch (Exception ex) {} err.printStackTrace(); fail("H5.H5Gget_info: " + err); } assertNotNull(info); try {H5.H5Gclose(gid);} catch (Exception ex) {} } @Test(expected = NullPointerException.class) public void testH5Gget_info_by_name_null() throws Throwable { H5.H5Gget_info_by_name(-1, null, HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Gget_info_by_name_invalid() throws Throwable { H5.H5Gget_info_by_name(-1, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Gget_info_by_name_not_exists() throws Throwable { H5.H5Gget_info_by_name(H5fid, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT); } @Test public void testH5Gget_info_by_name() { H5G_info_t info = null; int gid = _createGroup(H5fid, "/testH5Gcreate"); assertTrue(gid > 0); try { info = H5.H5Gget_info_by_name(gid, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { try {H5.H5Gclose(gid);} catch (Exception ex) {} err.printStackTrace(); fail("H5.H5Gget_info_by_name: " + err); } assertNotNull(info); try {H5.H5Gclose(gid);} catch (Exception ex) {} } @Test public void testH5Gget_info_by_name_fileid() { H5G_info_t info = null; int gid = _createGroup(H5fid, "/testH5Gcreate"); assertTrue(gid > 0); try {H5.H5Gclose(gid);} catch (Exception ex) {} try { info = H5.H5Gget_info_by_name(H5fid, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { try {H5.H5Gclose(gid);} catch (Exception ex) {} err.printStackTrace(); fail("H5.H5Gget_info_by_name: " + err); } assertNotNull(info); try {H5.H5Gclose(gid);} catch (Exception ex) {} } @Test(expected = NullPointerException.class) public void testH5Gget_info_by_idx_null() throws Throwable { H5.H5Gget_info_by_idx(-1, null, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5_ITER_INC, 1, HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Gget_info_by_idx_invalid() throws Throwable { H5.H5Gget_info_by_idx(-1, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5_ITER_INC, 1, HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Gget_info_by_idx_not_exists() throws Throwable { H5.H5Gget_info_by_idx(H5fid, "/testH5Gcreate", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 1, HDF5Constants.H5P_DEFAULT); } @Test public void testH5Gget_info_by_idx() { H5G_info_t info = null; int gid = _createGroup(H5fid, "/testH5Gcreate"); assertTrue(gid > 0); try { info = H5.H5Gget_info_by_idx(gid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Gget_info_by_idx: " + err); } assertNotNull(info); try {H5.H5Gclose(gid);} catch (Exception ex) {} } @Test public void testH5Gget_info_by_idx_fileid() { H5G_info_t info = null; int gid = _createGroup(H5fid, "/testH5Gcreate"); assertTrue(gid > 0); try {H5.H5Gclose(gid);} catch (Exception ex) {} try { info = H5.H5Gget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Gget_info_by_idx: " + err); } assertNotNull(info); } }