# The root directory of the data store storeroot-dir = targets/store # The directory to watch for incoming data. incoming-dir = targets/incoming # The store format that should be applied in the incoming directory. incoming-dir.format = # The check interval (in seconds) check-interval = 5 # The URL of the LIMS server server-url = http://localhost:8080/openbis/services/etl-openbis # The username to use when contacting the LIMS server username = etlserver # The password to use when contacting the LIMS server password = doesntmatter # The code of the organization to process data sets organization-code = 3V # SMTP properties (must start with 'mail' to be considered). # mail.smtp.host = localhost # mail.from = etlserver@localhost # Maximum number of retries if renaming failed. # renaming.failure.max-retries = 12 # The number of milliseconds to wait before retrying to execute the renaming process. # renaming.failure.millis-to-sleep = 5000 # --------------------------------------------------------------------------- # Plugin properties # --------------------------------------------------------------------------- # The extractor class to use for code extraction code-extractor = ch.systemsx.cisd.etlserver.threev.CodeExtractor # The separator that separates an experiment code from the data set one code-extractor.entity-separator = == # The separator that separates project code from experiment code code-extractor.project-separator = . # The extractor class to use for type extraction type-extractor = ch.systemsx.cisd.etlserver.SimpleTypeExtractor # The storage processor (IStorageProcessor implementation) # storage-processor = ch.systemsx.cisd.etlserver.DefaultStorageProcessor storage-processor = ch.systemsx.cisd.etlserver.BDSStorageProcessor storage-processor.version = 1.0 storage-processor.measurementEntityTypeDescription = screening plate storage-processor.processingType = RAW_DATA storage-processor.format = HCS_IMAGE V1.0 storage-processor.number_of_channels = 1 storage-processor.contains_original_data = true storage-processor.well_geometry = 3x3 storage-processor.plate_geometry = 16x24 storage-processor.file-extractor = ch.systemsx.cisd.etlserver.threev.HCSImageFileExtractor